The Indus Valley is Genetically Distinct from North India
Conventional wisdom has long held that the principal genetic divisions in South Asia are generally tied to linguistic differences…
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the Pakistani (Indus Valley) populations differ substantially from most of the Indian populations and show comparably low genetic differentiation (within the FST range of 0.008–0.020) from European, Near Eastern, Caucasian, and Indian populations (Figure 1 and Figures S1 and S11). In agreement with previous Y-chromosome studies,41,42 the Brahmin and Kshatriya from Uttar Pradesh stand out by being closer to Pakistani (FST = 0.006 on average) and West Eurasian populations (FST = 0.030) than to other Indian populations (average FSTs 0.017 and 0.046, respectively) from the same geographic area (Figures S1 and S11).
I don't think that PAC chart properly highlights the visual distance, other reference populations should have been added.
Also, it's better to just calculate the averages rather than adding individual samples, makes it much more cleaner. I recommend using G25 views.
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Here is one with ancient samples from Pakistan, perhaps @Indus Pakistan may find it interesting.
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